740 Omics and High-Throughput Technologies

Thursday, November 17, 2016: 3:15 PM - 5:45 PM
Continental 8 (Hilton San Francisco Union Square)
Description:
This session invites presentations on the latest developments in (1) experimental approaches for measuring high-dimensional data from large numbers of samples or on genome-scale data sets, (2) computational approaches to automate analysis of such data sets, and (3) application of such approaches to key biomedical systems relevant in biotechnology, disease understanding, and therapeutic development. Examples include but are not limited to: novel screening assays for drug discovery and development, next-gen high-throughput gene expression measurements, and proteomics of large numbers of samples.

Sponsor:
Engineering Fundamentals in Life Science
Co-Sponsor(s):
Bioengineering (15C)

Chair:
Ipsita Banerjee
Email: ipb1@pitt.edu

Co-Chair:
Belinda S. Akpa
Email: bsakpa@ncsu.edu


3:15 PM
(740a) Ultrasensitive Microfluidic Assay for Genome-Wide DNA Methylation Analysis and Precision Medicine
Sai Ma, Zhixiong Sun, Hehuang Xie, Chen Sun, Travis Murphy and Chang Lu

3:33 PM
(740b) Recurrent Patterns of DNA Copy Number Alterations in Tumors Reflect Metabolic Selection Pressures
Nicholas Graham, Aspram Minasyan, Anastasia Lomova, Ashley Cass, Nikolas Balanis, Michael Friedman, Shawna Chan, Sophie Zhao, Adrian Delgado, Lillie Beck, Christian Hurtz, Carina Ng, Rong Qiao, Johanna ten Hoeve, Nicolaos Palaskas, Hong Wu, Markus Müschen, Asha Multani, Elisa Port, Steven Larson, Nikolaus Schultz, Daniel Braas, Heather Christofk, Ingo Mellinghoff and Thomas Graeber

3:51 PM
Break

4:09 PM
(740d) Comparative Mapping of Dengue Virus-Host Interactions Using Global Proteomics
Priya Shah, Gwen Jang, Jeff Johnson, John Von Dollen, Billy Newton, Laura Satkamp, Mark Kunitomi, Federico de Maio, Ana Fernandez-Sesma, Andrea Gamarnik, Raul Andino and Nevan Krogan

4:27 PM
(740e) A Capture-Based Technique for Enhancing RNA-Seq Analysis of Bacterial Transcriptomes during in Vitro and In Vivo Infections
Robert J. Meagher, Zachary W. Bent, Annette E. LaBauve and Kunal Poorey

4:45 PM
(740f) Biologically Consistent Annotation for Metabolite Identification from Metabolomics Data
Nicholas Alden, Sara Manteiga, Rani Menon, Smitha Krishnan, Avita Sharma, Vladimir Porokhin, Elena Cokova, Jeremy Colebrook-Soucie, Arul Jayaraman, Soha Hassoun and Kyongbum Lee

5:03 PM
(740g) Deductive Determination of Dynamic Cellular Objectives from Biological Data
Frank T. DeVilbiss, Mano R. Maurya, Shakti Gupta, Shankar Subramaniam and Doraiswami Ramkrishna

5:21 PM
(740h) ‘Omics Profiling of a Continuous Manufacturing CHO Production Platform for Monoclonal Antibodies
Vania Bertrand, Daniel Karst, Miroslav Soos and Massimo Morbidelli
See more of this Group/Topical: Food, Pharmaceutical & Bioengineering Division
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