72 in silico Systems Biology - Emerging Approaches

Monday, November 9, 2015: 8:30 AM - 11:00 AM
155A (Salt Palace Convention Center)

Description:
We aim for a diverse session that demonstrates the utility of mathematical modeling of reaction, transport phenomena, and/or thermodynamics as applied to a broad array of biological systems on several length and time scales. We welcome presentations of new approaches, paradigms and/or systems for both fundamental advancement and biotechnological or medical applications. Theoretical and computational studies with an experimental component are encouraged.

Sponsor:
Emerging Frontiers in Systems and Synthetic Biology
Co-Sponsor(s):
Bioengineering (15C), Engineering Fundamentals in Life Science (15D)
Chair:
Neda Bagheri Email: n-bagheri@northwestern.edu
Co-Chair:
Rudiyanto Gunawan Email: rudi.gunawan@chem.ethz.ch


8:30 AM
(72a) The Dionesus Algorithm Provides Scalable and Accurate Reconstruction of Biological Networks to Reveal New Drug Targets
Mark Ciaccio and Neda Bagheri


8:48 AM
(72b) An Integrated Engineering Control System Model of Primary and Secondary Hemostasis
Chia-Hung Tsai, Ulhas P. Naik and Babatunde A. Ogunnaike


9:06 AM
(72c) Development of Kinetic Models of Metabolism for Microbial Production
Ali Khodayari, Satyakam Dash, Matthew Theisen, Ahsanul Islam, Yuting Zheng, James C. Liao, Gregory Stephanopoulos and Costas D. Maranas


9:24 AM
(72d) GEM-Path: A Novel Pathway Prediction Algorithm and Commodity Chemical Production Atlas
Adam M. Feist


9:42 AM
Break


9:48 AM
(72e) Prediction of Gene Expression Using Goal-Directed Metabolic Models
Frank T. DeVilbiss, Mano R. Maurya, Shakti Gupta, Aravinda Mandli, Shankar Subramaniam and Doraiswami Ramkrishna


10:06 AM
(72f) Network Motifs and Mechanisms for Oscillatory Dynamics of Biochemical Networks
Igor Schreiber, František Muzika, Lenka Schreiberova, Martin Kohout and Michal Pribyl


10:24 AM
(72g) Asymmetry in Signal Oscillations Contributes to Efficiency of Periodic Systems
Seul-A Bae, Alison Acevedo and Ioannis P. Androulakis


10:42 AM
(72h) Dynamic Modeling of Molecular Motor Association with Axonal Amyloid Precursor Protein Vesicles
Mano R. Maurya, Lukasz Szpankowski, Lawrence S.B. Goldstein and Shankar Subramaniam
See more of this Group/Topical: Topical Conference: Emerging Frontiers in Systems and Synthetic Biology
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