376 Computational Methods in Biological and Biomedical Systems

Tuesday, November 18, 2014: 3:15 PM
401 - 402 (Hilton Atlanta)
Description:
Biological approaches in chemical engineering are increasingly characterized by systems-level treatment of biological systems and the use of synthetic systems under complex control. Issues such as network size, network cross-talk, and parameter sloppiness can cause significant problems in both numerical analyses and biological interpretation that must be addressed. This session invites contributions that apply existing numerical methods to systems and synthetic biology problems, as well as contributions that identify unique numerical problems that arise in such biological systems and address them with novel approaches.

Sponsor:
Applied Mathematics and Numerical Analysis
Co-Sponsor(s):
Food, Pharmaceutical & Bioengineering Division (15)

Chair:
Roman Voronov
Email: roman.s.voronov@njit.edu

Co-Chair:
Ashlee N. Ford Versypt
Email: ashleefv@mit.edu

- indicates paper has an Extended Abstract file available on CD.


3:15 PM
(376a) Mechanistic Insights into Early Endoderm Differentiation of Human Embryonic Stem Cells Using Systems Level Analysis of Signaling Interactions
Shibin Mathew, Sankaramanivel Sundararaj, Hikaru Mamiya and Ipsita Banerjee

3:33 PM
(376b) Multi-Agent Model of Vascularized Bone Tissue Growth within Porous Biomaterials
Elif S. Bayrak, Hamidreza Mehdizadeh, Sami Somo, Banu Akar, Eric M. Brey and Ali Cinar
File available
3:51 PM
(376c) Simple Model of the Anthocyanins Effect on Carcinoma Growht
Javier Davila Sr., Moshe Rosenberg, Juan Higuita Sr. and Carlos A. Cardona

4:09 PM
(376d) Registration and Dimensionality Reduction Algorithms for the Analysis of Drosophila Embryogenesis Images
Carmeline Dsilva, Bomyi Lim, Amit Singer, Stanislav Y. Shvartsman and Ioannis G. Kevrekidis

4:27 PM
(376e) Effects of Thermal Stress on the Mechanical Deformation of Cardiac Tissue
Azzam Hazim, Youssef Belhamadia and Stevan Dubljevic

4:45 PM
(376f) Uncertainty in Clinical Data and Stochastic Model for in-Vitro Fertilization
Kirti Yenkie and Urmila Diwekar

5:03 PM
(376g) Optimization of HIV Treatment Schedules Based on the Mitochondrial Toxicity of Nucleoside-Analogue Antiretroviral Agents
Premanand A. Srinivasan and Antonios Armaou
File available
5:21 PM
(376h) Development of a Generic Physiology Based Biokinetic Model for Predicting Internal Dose and Assimilation of Biomonitoring Data for Industrial Chemicals
Dimosthenis Sarigiannis, Spyros Karakitsios, Alberto Gotti, Evaggelos Handakas and Kristalia Papadaki
See more of this Group/Topical: Computing and Systems Technology Division
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